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nf-core / tools

Python package with helper tools for the nf-core community.
https://nf-co.re
MIT License
233 stars 187 forks source link

Fix nf-core pipelines sync #3185

Open mirpedrol opened 7 hours ago

mirpedrol commented 7 hours ago

The old nf-core sync command was crashing, now it is fixed.

The new nf-core pipelines sync command was not taking into account the template information from .nf-core.yml and was also crashing for pipelines without the template information. Now it uses this info to sync a pipeline.

Testing PRs syncing nf-core and custom pipelines can be found here: nf-core and custom