nf-core / tools

Python package with helper tools for the nf-core community.
https://nf-co.re
MIT License
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`--dir / -d` argument not available for `pipeplines schema lint, validate, docs` #3234

Closed nschan closed 1 month ago

nschan commented 1 month ago

Hello,

I noticed that only some of the commands in nf-core tools pipelines schema accept --dir/-d.

Here is an of pipelines commands and if they take --dir

Command --dir
nf-core pipelines create No
nf-core pipelines lint Yes
nf-core pipelines schema build Yes
nf-core pipelines schema lint No
nf-core pipelines schema validate No
nf-core pipelines schema docs No
nf-core pipelines sync Yes
nf-core pipelines bump-version Yes
nf-core pipelines create-logo Yes

I guess it would be nice to be able to use -d with all schema subcommands.