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nf-core / viralintegration

Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.
https://nf-co.re/viralintegration
MIT License
16 stars 8 forks source link

Use CTAT singularity image #21

Open edmundmiller opened 2 years ago

edmundmiller commented 2 years ago

Description of feature

https://data.broadinstitute.org/Trinity/CTAT_SINGULARITY/VirusInsertionFinder/ctat_vif.v1.0.1.simg

We just threw the docker image in.

edmundmiller commented 1 year ago

Priority might be finding what's actually needed in each process and breaking the images up into smaller pieces.