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nf-core / website

Code and files for the main nf-core website.
https://nf-co.re
MIT License
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question regarding computational power #2837

Closed mggrami closed 2 weeks ago

mggrami commented 2 weeks ago

I have a question regarding computational power. I'd like to know how much RAM is sufficient to run each tool in sarek pipeline. I am analyzing exome derived from cancerous cell lines using typical command running in a docker. I was only able to run preprocessing and strelka with 34 GB RAM, any other tool employed for a job was halted due to insufficient amount of RAM.

Sincerely, Michał

mashehu commented 2 weeks ago

please ask in the sarek-channel on the nf-core slack.