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nf-osi / nfportalutils

Utilities for NF Portal project and data management
https://nf-osi.github.io/nfportalutils/
MIT License
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fq.gz is not always geneExpression #135

Open allaway opened 11 months ago

allaway commented 11 months ago

This will cause some errors - this could also be WGS, WES, etc. https://github.com/nf-osi/nfportalutils/blob/58e8d84af34b99e59f5b4748a6257c53cbb3f807/R/annotation_reference.R#L63

anngvu commented 11 months ago

Yeah, I think the refinement was to try to include assay context if possible. These are not bulletproof yet.