Closed anngvu closed 1 month ago
There appears to be a synapser
issue that has to be resolved upstream of us. So on Linux stable source build, can use synapser::synSetAnnotations
just fine. On MacOs and Windows, one gets the error
Error: 'synSetAnnotations' is not an exported object from 'namespace:synapser'
@anngvu, should we report this on Sage-Bionetworks/synapser?
Reported in https://github.com/Sage-Bionetworks/synapser/issues/331. I think for now best solution is to specify synapser
(>= 1.0.0) and < 2.0 and update CI workflow.
PR Preview Action v1.4.7
:---:
:rocket: Deployed preview to https://nf-osi.github.io/nfportalutils/pr-preview/pr-171/
on branch gh-pages
at 2024-03-13 00:35 UTC
Update 2:
Merging this into develop-synapser
isntead of main develop
for now.
Update:
synapser
(>= 1.0.0) and < 2.0, suggesting you use1.3.0
, see linked issue discussion regardingsynSetAnnotations
. However, by the time everything is refactored, I trust thatsynapser
will have added backsynSetAnnotations
.brew
issue upstream that will be resolved eventually, see discussion at https://github.com/r-lib/actions/issues/280