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nfdi4plants / ARCCommander

Tool to manage your ARCs
MIT License
11 stars 9 forks source link

[BUG] Assay identifier is not added to isa.investigation file #234

Closed andreaschrader closed 7 months ago

andreaschrader commented 7 months ago

Describe the bug When registering an assay, there is no assay identifier row in all three isa.xlsx files.

To Reproduce Initiate an ARC, add a study with an assay (arc a add -s MyStudy -a MyAssay)

Expected behavior A row with the assay identifier similar to study identifier.

OS and framework information (please complete the following information): macOS arc commander v0.5.0 same for v1.0.0 (preview2)

HLWeil commented 7 months ago

Hey @andreaschrader,

this is because this field does neither exist in ISA Tab nor ISA Json (which is a shame). Having the Identifier as a argument is just for user convenience.

Feel free to add your perspective in https://github.com/nfdi4plants/ARC-specification/issues/74.