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nghiavtr / FuSeq

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duplicate reads #12

Open colsen opened 5 years ago

colsen commented 5 years ago

Hi,

I am wondering how you deal with duplicate reads? Are they discarded anywhere in the pipeline?

Thanks for your help, Cat

nghiavtr commented 5 years ago

Hi Cat,

FuSeq does not discard the duplicate reads. They are all taken into account in the downstream statistical tests.

Best, Nghia