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ngless-toolkit / ngless2018benchmark

Benchmarking ngless
https://ngless.embl.de
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Reading in fastq.gz files #2

Closed waakanni closed 5 years ago

waakanni commented 5 years ago

NGLess load_mocat_sample does not ignore empty lines at the end of a fastq.gz file. Not sure if this is a bug or just something it was not meant to do

This is happening on both versions 1.0.1 and 0.7.1

error:


Exiting after fatal error while loading and running script
Data Error (the input data did not conform to ngless' expectations)
Number of input lines in FastQ file is not a multiple of 4
luispedro commented 5 years ago

Thanks for the report, but I am moving it to https://github.com/ngless-toolkit/ngless/issues/115 and answering there.