nhanhocu / metamicrobiomeR

An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studies using random effects models

https://github.com/nhanhocu/metamicrobiomeR

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R version 3.5.0 #1

Closed koen-venema2 closed 5 years ago

koen-venema2 commented 5 years ago

Sorry for not being an IT wizz, but I run R 3.5.0 in RStudio, and the unpon trying to install the package the program tells me ‘metamicrobiomeR’ is not available (for R version 3.5.0), but the Description file says "Depends: R (>= 3.4.2)". What am I missing??

nhanhocu commented 5 years ago

Hi, Sorry that I have not been active on github recently and to give you a prompt response. Did you follow the installation tutorial? Can you copy the steps/codes you did and the corresponding error messages? Many thanks, Nhan PS: you need to install "devtools" before installing the package "metamicrobiomeR" from github, and your computer need internet access.
rm(list=ls()) # clear all install.packages("devtools") library(devtools)

install and load package metamicrobiomeR

install_github("nhanhocu/metamicrobiomeR") library(metamicrobiomeR)

theo-allnutt-bioinformatics commented 5 years ago

I also got multiple errors (many pages) on installation, saying packages not available for metamicrobiomeR.

theo-allnutt-bioinformatics commented 5 years ago

Devtools was installed.

nhanhocu commented 5 years ago

Hi, Please update your R to most recent version and you should be able to to install the package "metamicrobiomeR". My R version is 3.5.1 and it worked (same for R 6.0). Sorry I will update the DESCRIPTION file.