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nhanhocu / metamicrobiomeR

An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studies using random effects models
https://github.com/nhanhocu/metamicrobiomeR
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adjustvar in taxa.compare #17

Open choon-sim opened 3 years ago

choon-sim commented 3 years ago

Hi, in taxa.compare, can I leave adjustvar as blank if I have no variable to adjust? I have tried empty string, NA, FALSE, etc. but it gives an error message 

"Error in `[.data.frame`(taxdat, , c(taxname[i], comvar, adjustvar)) : 
  undefined columns selected".

If I place any variable at adjustvar, then it runs fine.

nhanhocu commented 3 years ago

Hi, Thanks for trying our package. You can try adjustvar=NULL Bests,