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nhanhocu / metamicrobiomeR

An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studies using random effects models
https://github.com/nhanhocu/metamicrobiomeR
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example 1: `Error: $ operator is invalid for atomic vectors` #7

Open cocomushroom opened 4 years ago

cocomushroom commented 4 years ago

Hi, I was trying to run example 1. It worked for the first part, but I received the error message: Error: $ operator is invalid for atomic vectors after I ran 

kable(taxcomtab.show(taxcomtab=taxacom6.zi.rmg,tax.select=p.bf.l2$taxuse.rm, showvar="bfNon_exclusiveBF", tax.lev="l2",readjust.p=TRUE,p.adjust.method="fdr",p.cutoff = 1))

I was using the github version abab1a77c114533707c99b0d2016c27c85cfc579

nhanhocu commented 4 years ago

Hi, Thanks for trying out the package. Please try the R-cran version of the package at: https://cran.r-project.org/web/packages/metamicrobiomeR/index.html . If you still see problem with examples, please let me know. Many thanks,