While I'm thoroughly enjoying the robustness of your tool's clustering (thank you!), I thought I might make a feature request. Sniffles (https://github.com/fritzsedlazeck/Sniffles) calls SVs from long reads, and outputs a number of complex SV types that are not currently handled by svanalyzer such as BND, DEL/INV, DUP, INV, INV/INVDUP, INVDUP. While some of them may be harder to handle, would it be simple to at least include INV svtype handling, since the event is defined by a (START,END) point similar to DELs?
While I'm thoroughly enjoying the robustness of your tool's clustering (thank you!), I thought I might make a feature request. Sniffles (https://github.com/fritzsedlazeck/Sniffles) calls SVs from long reads, and outputs a number of complex SV types that are not currently handled by svanalyzer such as BND, DEL/INV, DUP, INV, INV/INVDUP, INVDUP. While some of them may be harder to handle, would it be simple to at least include INV svtype handling, since the event is defined by a (START,END) point similar to DELs?