search

nhansen / SVanalyzer

Tools for the analysis of structural variation in genomes
http://svanalyzer.readthedocs.io/
Other
76 stars 14 forks source link

Conda installation command in README.md not working #17

Closed yueyaog closed 1 year ago

yueyaog commented 1 year ago

I tried to install SVanalyzer using the conda install svanalyzer command as specified in the README.md file. However, I received the following error message:

PackagesNotFoundError: The following packages are not available from current channels:
- svanalyzer

After some research, I found that the correct command to install SVanalyzer using conda is conda install -c bioconda svanalyzer.

I suggest updating the README.md file to reflect this change in the installation command, as it can save others from experiencing the same issue.

Thank you for maintaining this svanalyzer.

nhansen commented 1 year ago

Thanks so much for pointing this out! Yes, if you don't have bioconda specified as a default channel in your .condarc file, you'll need to use the -c bioconda option when installing with conda. I've updated the README to reflect this.