Can't locate GTB/File.pm

nhansen / SVanalyzer

Tools for the analysis of structural variation in genomes

http://svanalyzer.readthedocs.io/

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Can't locate GTB/File.pm #19

Closed Cauwth closed 5 months ago

Cauwth commented 5 months ago

In Ubuntu22.04,when using svanalyzer,it reported: Can't locate GTB/File.pm in @INC (you may need to install the GTB::File module) I tried cpan GTB::File and cpanm GTB::File.But ! Couldn't find module or a distribution GTB::File how can i get it?? thank u

nhansen commented 5 months ago

Did you install using conda or the instructions under "Building github version on your own"? The GTB::File module is included with the distribution in this repository. It sounds like SVanalyzer isn't installed correctly

Cauwth commented 5 months ago

thank you.add PERL5LIB="/home/user/miniconda3/envs/svanalyzer/lib/site_perl/5.26.2:/home/user/perl5/lib/perl5${PERL5LIB:+:${PERL5LIB}}"; export PERL5LIB; to ~/.bashrc can solve this.