021 ncbi fetch - Githubissues

nhoffman / bioy

Tools for NGS sequence analysis and bacterial classification

GNU General Public License v3.0

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Closed tyleraland closed 9 years ago

tyleraland commented 9 years ago

ncbi_fetch

Given: csv file of sequence identifiers (in NCBI, either gi or genbank ids) and start/stop bases
Output: multi-fasta of the requested sequences and, optionally, an info file that will retrieve its taxid as well

nhoffman commented 9 years ago

Looks good see my one comment inline.