condensing group tax_ids to size 4: 244%

[crosenth]

bioy v1.9:

bioy classifier --specimen-map output/059_22/map.csv.bz2 --weights output/059_22/weights.csv.bz2 --copy-numbers /home/molmicro/common/rrndb/output/11_3/rdp/rrnDB_16S_copy_num.csv --max-identity 100 --min-identity 80 --min-coverage 90 --max-group-size 4 --out output/059_22/classification.1.csv --details-out output/059_22/details.1.csv.bz2 output/059_22/rdp.blast.bz2 /home/molmicro/common/rdp/11_3/output/tax_filter/filtered/seq_info.csv <(csvcut -c tax_id,tax_name,rank,root,kingdom,phylum,class,order,family,genus,species /home/molmicro/common/rdp/11_3/output/tax_filter/filtered/taxonomy.csv) && bioy csvmod --inplace --add blast_database:rdp output/059_22/classification.1.csv && bioy csvmod --inplace --add blast_database:rdp output/059_22/details.1.csv.bz2

selecting valid blast hits: 100% selecting valid blast hits: 100% condensing group tax_ids to size 4: 244%

[crosenth]

bioy classifier --specimen-map output/001_18/map.csv.bz2 --weights output/001_18/weights.csv.bz2 --copy-numbers /home/molmicro/common/rrndb/output/11_3/rdp/rrnDB_16S_copy_num.csv --max-identity 100 --min-identity 80 --min-coverage 90 --max-group-size 4 --out output/001_18/classification.3.csv --details-out output/001_18/details.3.csv.bz2 output/001_18/rdp_unfiltered.blast.bz2 /home/molmicro/common/rdp/11_3/output/named/seqs.seq_info.csv <(csvcut -c tax_id,tax_name,rank,root,kingdom,phylum,class,order,family,genus,species /home/molmicro/common/rdp/11_3/output/named/taxonomy.csv) && bioy csvmod --inplace --add blast_database:rdp_unfiltered output/001_18/classification.3.csv && bioy csvmod --inplace --add blast_database:rdp_unfiltered output/001_18/details.3.csv.bz2

selecting valid blast hits: 100% condensing group tax_ids to size 4: 16591% creating compound assignments: 910351%