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nhoffman / dada2-nf

A Nextflow pipeline for processing 16S rRNA sequences using dada2
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Add fastq_list.txt file specified specified in params.json to pipeline output #19

Closed dhoogest closed 3 years ago

dhoogest commented 3 years ago

This is somewhat redundant if access to the original fastq_list.txt location is available to a user, however in some situations it would be beneficial to have the file presented alongside the input sample_information.csv file in the main pipeline /output location.

dhoogest commented 3 years ago

@mwohl figure this one will be useful for you and I to take to familiarize ourselves with nextflow a little.

dhoogest commented 3 years ago

Still some learning to do, but #20 shows a solution that works for me in local testing.

dhoogest commented 3 years ago

Closed with completion of #20