nhoffman / dada2-nf

A Nextflow pipeline for processing 16S rRNA sequences using dada2
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conditinalize in event that yld[si] is zero to avoid divide by zero err #76

Closed dhoogest closed 1 year ago

dhoogest commented 1 year ago

addresses #75

$ ./nextflow ./main.nf -params-file params.json test passing following change.

crosenth commented 1 year ago

Added step to drop empty raw fastqs before barcodecop but note they will still be processed and counted in read_manifest

crosenth commented 1 year ago

https://github.com/nhoffman/dada2-nf/issues/75