niaid / image_portal_workflows

Workflows related to project previously referred to as "Hedwig"
BSD 3-Clause "New" or "Revised" License
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ROI pipeline run failed in Dev - 9/15/2023 #317

Closed NetaFG closed 1 year ago

NetaFG commented 1 year ago

https://prefect1.hedwig-workflow-api.niaiddev.net/default/flow-run/b3e941e9-14c2-446d-b5b5-2232c1136cd6?schematic image

It seems that Zarr generation failed.

annshress commented 1 year ago

https://prefect1.hedwig-workflow-api.niaiddev.net/default/flow-run/f70408d1-8e39-429e-90a0-7c43a42fe9df

Output of the same flow run.

The tentative underlying issue has been reported here: https://github.com/glencoesoftware/bioformats2raw/issues/217

NetaFG commented 1 year ago

Re-Tested on 9/20/2023 through the interface and the pipeline run completed successfully. Test = PASS. Pipeline run : https://prefect1.hedwig-workflow-api.niaiddev.net/default/flow-run/8c6ecc1a-0588-4298-b598-688475843935 Hedwig UI: https://goat.niaid.nih.gov:7333/sessions/U2Vzc2lvbjozNTU0/records#N4IgSgpgxg9gTgEwDIEsDOAXFA7A5iALlADUBRMAZQEkB5AOUIEYAaEYgQSQFVTDQ0IAQzhQAFhQxwc+AiBCsADsIjYMFQQFsFAGwgAxFNowQ4hANoguAJj0YoAcQAe2mgCtSATxoARayAC6rMoGRiZoFKIwAO7YhJIArhAAvilAA=== image

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