process 2D 16-bit Tiffs with newstack - Githubissues

niaid / image_portal_workflows

Workflows related to project previously referred to as "Hedwig"

BSD 3-Clause "New" or "Revised" License

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process 2D 16-bit Tiffs with newstack #468

Closed blowekamp closed 2 months ago

blowekamp commented 4 months ago

Replace range preserving conversion method with newstack to provide pixel intensity normalization, improve denoising during resampling, and handling of outlier pixels.

Addresses (eg: #1)

Depends on (eg: #1)

Changes

List of changes
Breaking changes
Changes to configurations

This PR doesn't introduce any:

[ ] Binary files
[ ] Temporary files, auto-generated files
[ ] Secret keys
[ ] Local debugging print statements
[ ] Unwanted comments (e.g: # Gets user from environment for code os.environ['user'] )

This PR contains valid:

[ ] tests