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nigyta / dfast_core

DDBJ Fast Annotation and Submission Tool
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Error running dfast -- Barrnap and Time::Piece #14

Closed yyan823 closed 5 years ago

yyan823 commented 5 years ago

Hello,

I just installed dfast on Mac High Sierra, try to run it and get this error below:

`

2019/04/19 10:20:40 Checking Barrnap version... 2019/04/19 10:20:40 Barrnap version could not be determined. Aborted... 2019/04/19 10:20:40 This may happen if Time::Piece cannot be found. If you are using CentOS/RedHat, try 'sudo yum install perl-Time-Piece'.

`

I tried to install cpanm and from cpanm install Time::Piece, but it didn't solve the problem. And I checked the dfast tools folder, everything seems unzipped ok (which was mentioned in previous similar issue). Could you please help to see how to solve this?

updates:

Replacing barrnap file in bin/Darwin with the one in bin/Darwin/barrnap-0.8/bin/ solved this.

Thank you so much! Sincerely

nigyta commented 5 years ago

Dear yyan823,

Thank you for trying DFAST. It's great to hear that. Feel free to ask again if you have any trouble.

Yasuhiro