nigyta / dfast_core

DDBJ Fast Annotation and Submission Tool
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[[enhancement]] add post-link.sh to conda #38

Closed laxeye closed 2 years ago

laxeye commented 2 years ago

Dear developers, @nigyta,

is it possible to add post-link.sh file to bioconda recipe folder to automatically download default databases like in Dockerfile (commented line)? Otherwise after installation from conda user shouldn't forget to download the databases before running DFAST.

This file could include just two lines of code:

#!/bin/bash
dfast_file_downloader.py --protein dfast --cdd Cog --hmm TIGR

Regards, Aleksei

laxeye commented 2 years ago

It seems, that bioconda team doesn't like that solution.

nigyta commented 2 years ago

Hi, @laxeye Thank you for the comment. Actually, it had a post-link.sh script in the past. But it was removed as per the reviewer of the Bioconda recipe.