nigyta / dfast_core

DDBJ Fast Annotation and Submission Tool
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Nucleotide ambiguity codes in the FASTA file #4

Open nigyta opened 6 years ago

nigyta commented 6 years ago

When an input FASTA file contains ambiguous nucleotides such as W and R, DFAST abort with a Biopython translation error.

"Extra in frame stop codon found." Bio.Data.CodonTable.TranslationError: Extra in frame stop codon found.