jeremywalter
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3 years ago Welcome
Kids First:Dave Roberson
Closed jeremywalter closed 3 years ago
jeremywalter
commented
3 years ago Kids First:Dave Roberson
jeremywalter
commented
3 years ago The next scheduled meeting is Tuesday, July 6th. Regular Cross-Pollination events take place on the first Tuesday of every month. Please check out the Cross-Pollination Schedule and let us know if you would like to present! Please contact us today if you are interested in presenting at support@cfde.atlassian.net.
On June 21st and 23rd we are hosting a two part (2 hours each session) workshop series that provides hands-on experience in conducting basic RNA-Seq analysis in the cloud. This workshop has been fully booked! Send inquiries to training@cfde.atlassian.net if you would like to know more.
On June 30th at 10am PDT / 12pm EDT, our popular 2-hour workshop: Intro to AWS introduces you to creating a computer “in the cloud” and logging into it, via Amazon Web Services. We create a small general-purpose Linux computer connect to it, and run a small job, while discussing the concepts and technologies involved. Click Here to Register!
Please check out the CFDE Events Calendar to find and register for these and other future events. Our workshops are open to all, so feel free to share this information with interested friends and colleagues.
The Fair Data Informatics (FDI) Laboratory is looking for a knowledge engineering Post-Doc (apply@fdilab.org) at the University of California, San Diego with a background in Computer Science, Informatics or a related field. This Post-Doc will be responsible for knowledge engineering and supporting systems involved in the querying, viewing, federating, analyzing, and managing of bio-medical ontologies and the use of these ontologies in the annotation of primary research data and the representation of knowledge extracted from this data related to NIH Common Fund projects. See https://www.fdilab.org/positions-available for more information.
The next meeting for the CFDE Anatomy Working Group is yet to be scheduled. You can see the cAWG Agenda for meeting notes and information on communicating with or joining the group.
The next meeting for the Gene Working Group is Wednesday, June 30 @ 11am PDT / 2pm EDT. Join the mailing list to get involved. You can view the draft charter for more details about the goals and activities proposed for the group.
The next meeting for the Ontology Working Group is scheduled for Wednesday, July 14, at 8am PDT / 11am EDT. Ontology Working Group meetings are normally scheduled bi-weekly on Wednesdays (we are skipping June 30, however). You can get involved by joining their mailing list and slack channel.
Kids First: Dave Roberson
You can contribute to the next announcements by commenting on the open announcements issue in this repository. Share your events and updates by posting links and descriptions in our announcements issue!
Thank you all for your efforts and have a great week!
Jeremy Walter
CFDE Coordination Team
jeremywalter
commented
3 years ago The next scheduled meeting is Tuesday, July 6th. Regular Cross-Pollination events take place on the first Tuesday of every month. Please check out the Cross-Pollination Schedule and let us know if you would like to present! Please contact us today if you are interested in presenting at support@cfde.atlassian.net.
On June 16th at 10am PDT, join us and the LINCS Project for a 1-hour demonstration of using Appyters, which are web-based customizable Jupyter notebooks executed in the cloud, to generate downstream visualization and enrichment analysis from a list of differentially expressed genes. Appyters can be applied to a variety of workflows including building customized machine learning pipelines, analyzing omics data, and producing publishable figures. Click Here to Register.
On June 21st and 23rd we will host a two part (2 hour sessions each) workshop series that will provide hands-on experience in conducting basic RNA-Seq analysis in the cloud. We’ll go over how to process RNA-Seq data and cover the basics of differential gene expression and data visualization in R. This workshop will be conducted remotely via Zoom. The workshop Zoom link will be emailed to participants after registration closes. Participants should plan to fill out a brief survey before and after the workshop. Register here: June 21st: RNA-Seq in the Cloud Part I June 23rd: RNA-Seq in the Cloud Part II
Please check out the CFDE Events Calendar to find and register for these and other future events. Our workshops are open to all, so feel free to share this information with interested friends and colleagues.
The Fair Data Informatics (FDI) Laboratory is looking for a knowledge engineering Post-Doc (apply@fdilab.org) at the University of California, San Diego with a background in Computer Science, Informatics or a related field. This Post-Doc will be responsible for knowledge engineering and supporting systems involved in the querying, viewing, federating, analyzing, and managing of bio-medical ontologies and the use of these ontologies in the annotation of primary research data and the representation of knowledge extracted from this data related to NIH Common Fund projects. See https://www.fdilab.org/positions-available for more information
The next meeting for the CFDE Anatomy Working Group is yet to be scheduled. You can see the cAWG Agenda for meeting notes and information on communicating with or joining the group.
The next meeting for the Gene Working Group is yet to be scheduled. Join the mailing list to get involved. You can view the draft charter for more details about the goals and activities proposed for the group.
The next meeting for the Ontology Working Group is scheduled for Wednesday, June 16, at 8am PDT / 11am EDT. Ontology Working Group meetings are scheduled bi-weekly on Wednesdays. You can get involved by joining their mailing list and slack channel.
Kids First: Dani Cardona
CFDE-CC: Jose Sanchez
You can contribute to the next announcements by commenting on the open announcements issue in this repository. Share your events and updates by posting links and descriptions in our announcements issue!
Thank you all for your efforts and have a great week!
Jeremy Walter
CFDE Coordination Team
Add a comment containing your interesting links and announcements here! Let us know under which heading your post belongs (or add your own): Critical Announcements Events Meeting Outcomes Resources Tools New Releases Welcome/Farewell
*Please let us know if you would like your Announcements to be added to the Cross Pollination mailing list which includes Data Centers not onboarded with the CFDE.