jeremywalter
commented
3 years ago Welcome
4DNucleome: Andrew Schroeder GlyGen: Raja Mazumder, Rene Ranzinger, Jeet Vora, Michael Tiemeyer GM Kids First: Meen Chul Kim RTI: Dean Jackman
Closed jeremywalter closed 3 years ago
jeremywalter
commented
3 years ago 4DNucleome: Andrew Schroeder GlyGen: Raja Mazumder, Rene Ranzinger, Jeet Vora, Michael Tiemeyer GM Kids First: Meen Chul Kim RTI: Dean Jackman
jeremywalter
commented
3 years ago Our next scheduled meeting will take place on Tuesday, October 5th at 11am PDT / 2pm EDT. Representatives from Ex-RNA, HuBMAP, and GTEx will be presenting. Please contact us today if you are interested in presenting at an upcoming event at support@cfde.atlassian.net! Regular Cross-Pollination events take place on the first Tuesday of every month. Please check out the Cross-Pollination Schedule for more details.
On October 4, our team plans to host our Intro to Conda lesson. You can explore the CFDE Events Calendar to find and register for future events. Our workshops are open to all, so feel free to share this information with interested friends and colleagues.
Two new RFCs are now available for comment by the community until October 15, 2021:
RFC stands for “Requests for Comments”. These are proposals being made by members of the CFDE to suggest that the CFDE community as a whole adopt the suggested new best practice. Everyone in the community is invited to respond to these proposals by leaving comments, critiques, and support at the links above. Comments are open for one month at which point the documents will be reviewed. If there are no substantial objections to the RFC in that time, it will be adopted as a CFDE Best Practice. You can read more about our RFC process here.
This new group will survey and evaluate existing resources and then recommend standards for metadata, file formats, and an API for the CFDE to facilitate storing, retrieving, and querying gene expression data. For more detail see the WG charter. We plan a kickoff meeting later in September. To register your interest, please contact Bob Carter (GH: @RLC-DCPPC ; Slack: (at)Bob Carter; e-mail: rlc.dcppc@gmail.com) or Anup Mahurkar (GH: @amahurkar; Slack: (at)Anup Mahurkar).
The Prototyping and Evaluation of Engineering Technology (PEET) Working Group will be focused on finding and evaluating existing software engineering solutions to meet CFDE-CC and DCC needs. This working group will evaluate and choose existing software implementations, and/or prototyping modifications to implementations, that support ecosystem functionality such as data retrieval and resource registries. Our kick-off meeting will be on Oct 1 at 8am PDT/ 11am EDT. The first meeting topic is "All about Appyters" and we will have a technical presentation and discussion about the underpinnings of the Appyter system.
Subscribe to the PEET Working Group mailing list to receive updates and links to this and future meetings: PEETWorkingGroup+subscribe@CFDEpublic.groups.io.
4DNucleome: Andrew Schroeder GlyGen: Raja Mazumder, Rene Ranzinger, Jeet Vora, Michael Tiemeyer GM Kids First: Meen Chul Kim RTI: Dean Jackman
You can contribute to the next announcements by commenting on the open announcements issue in this repository. Share your events and updates by posting links and descriptions in our announcements issue!
Thank you all for your efforts and have a great week!
Jeremy Walter
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