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A way for anyone in the group to quickly share announcements that are archived both in GitHub and our Announcements mailing list
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CFDE Announcements to Post 01-31-2022 #177

Closed jeremywalter closed 2 years ago

jeremywalter commented 2 years ago

Add a comment containing your interesting links and announcements here! Let us know under which heading your post belongs (or add your own): Critical Announcements Events Meeting Outcomes Resources Tools New Releases Welcome/Farewell

*Please let us know if you would like your Announcements to be added to the Cross Pollination mailing list which includes Data Centers not onboarded with the CFDE.

jeremywalter commented 2 years ago

Welcome

IDG: Christophe Lambert

AviMaayan commented 2 years ago

Hi @jeremywalter the date for the upcoming Gene WG meeting was incorrect in the latest announcement. The second Wednesday is February 9th.

cc @sherry-jenkins

jeremywalter commented 2 years ago
Working Group Date Time Agenda
Anatomy TBD 9am PT / 12pm ET Anatomy WG
Gene February 9th 11am PT / 2pm ET Gene WG
Gene Expression January 31st 11am PT / 2pm ET Gene Expression Data Exchange
Ontology February 9th 8am PT / 11am ET Ontology WG
PEET TBD PEET Charter
Variant February 8th 1pm PT / 4pm ET Variant WG
jeremywalter commented 2 years ago

CFDE Announcements -- OLD -- DRAFT

Cross-Pollination Events

Our next scheduled meeting will take place on Tuesday, February 1st at 11am PT / 2pm ET. This meeting will include an R03 presentation and the introduction of the Knowledge Graph Working Group. Regular Cross-Pollination events take place on the first Tuesday of every month. Please check out the Cross-Pollination Schedule for more details. We are currently looking for speakers for our February meeting. Please let us know at support@cfde.atlassian.net if you have something to share!

CFDE Training Efforts

On Wednesday, February 23, we will offer a two-hour Introduction to R for RNA-Seq Analysis workshop using public data from GTEx. Check out our Events Calendar for details and registration availability. If you have questions or suggestions for our training team, get in touch with us at training@cfde.atlassian.net

Funding Opportunity Announcement

Several valuable and widely available data sets have been generated by multiple Common Fund programs. The Pilot Projects Enhancing Utility and Usage of Common Fund Data Sets (R03 Clinical Trial Not Allowed) (RFA-RM-22-007) funding opportunity targets work designed to demonstrate and enhance the utility of selected Common Fund (https://commonfund.nih.gov/) data sets, including generating hypotheses and catalyzing discoveries. Award recipients are asked to provide feedback on the utility of the Common Fund data resources.

Eligible Common Fund Program Data Sets 4DN, ExRNA, Gabriella Miller Kids First, GTEx, Glycosciences, HuBMAP, IDG, iHMP, KOMP2, LINCS, Metabolomics, MoTrPAC, SPARC

Applications are due February 18, 2022, by 5:00 pm local time of the applicant organization.

Find answers to Frequently Asked Questions (FAQs) and learn more on the Enhancing the Use of Common Fund Data website. You can contact the CFDE team at CFDE@od.nih.gov with any additional questions. Please share this information widely with interested colleagues and relevant email lists.

Working Group Updates

Knowledge Graph Working Group

The CFDE Knowledge Graph Working Group has been established and will be co-chaired by Deanne Taylor from Kid's First and Jonathan Silverstein from HuBMAP. Those who have previously expressed interest in participating, please send an email to Kevin Hanshaw (kjhanshaw@psc.edu) to be included in any future correspondence about the WG. More details will be made available during the February 1st Cross-Pollination meeting.

Working Group Date Time Agenda
Anatomy TBD 9am PT / 12pm ET Anatomy WG
Gene February 9th 11am PT / 2pm ET Gene WG
Gene Expression February 14th 11am PT / 2pm ET Gene Expression Data Exchange
Ontology February 9th 8am PT / 11am ET Ontology WG
PEET TBD PEET Charter
Variant February 14th 1pm PT / 4pm ET Variant WG

Contributing

You can contribute to the next announcements by commenting on the open announcements issue in this repository. Share your events and updates by posting links and descriptions in our announcements issue! If you have questions about these or other events/activites in the CFDE, contact our helpdesk at support@cfde.atlassian.net

Thank you all for your efforts and have a great week!

Jeremy Walter

raynamharris commented 2 years ago

CFDE Training Efforts

On Wednesday, February 23, we will offer a two-hour "Introduction to R for RNA-Seq Analysis" workshop using public data from GTEx. Check out our Events Calendar for details and registration availability. If you have questions or suggestions for our training team, get in touch with us at training@cfde.atlassian.net