CFDE Announcements to Post 09-12-2022

[jeremywalter]

To share your announcement:

1. Add a comment containing your interesting links and announcements.
2. Specify the heading your post belongs (or add your own):

• Critical Announcements
• Events
• Meeting Outcomes
• Resources
• Tools
• New Releases
• Welcome/Farewell

3. Let us know if you would like your Announcements to be added to the Cross Pollination mailing list which includes Data Centers not onboarded with the CFDE

[jeremywalter]

Welcome

4D Nucleome: Rahi Navelkar GlyGen: Jonathon Keeney

[rajamazumder]

Heading: Events Post: The BioCompute workshop will be held this Tuesday, Sept 13th. at 10:30am (Eastern). We have partnered with DNAnexus and Seven Bridges in developing new tools for building Biocompute Objects on their platforms, and Galaxy for deposit to the public access-controlled BioComputeDB. If you are interested in workflows and communicating bioinformatics pipelines this might be of interest to you. Register at https://www.eventbrite.com/e/building-biocompute-objects-on-three-popular-bioinformatics-platforms-tickets-404095038137 Note: Please add to the Cross Pollination mailing list

[jeremywalter]

CFDE Announcements - DRAFT DRAFT DRAFT

Cross-Pollination Meeting

The next meeting will take place on Tuesday, October 4th, at 11am PT / 2pm ET. Our remaining 2022 Cross-Pollination meetings will be showcasing CFDE Partnership Projects as reflected on the schedule. However, we are still looking for additional talks each month. If you are interested please sign up to present at an upcoming Cross Pollination Meeting. Regular Cross-Pollination events take place on the first Tuesday of every month (Oct 4, Nov 8, and Dec 6). View the Cross-Pollination Schedule for more details. Email support@cfde.atlassian.net if you would like to present.

Upcoming Data Submission Deadline for CFDE Portal

The next data submission deadline for the CFDE Portal will be Friday, September 16. All groups who would like to update their data must submit and approve it by this deadline.

If you would not like to update or submit new data, no action is required on your part. Previously submitted data will be included in this data release.

• The latest master JSON schema: https://osf.io/c63aw/
• The submission script and prep tables: https://osf.io/bq6k9/
• Informational wiki: https://github.com/nih-cfde/published-documentation/wiki/C2M2-Table-Summary

Please contact the help desk with any questions at: support@cfde.atlassian.net

BioCompute Workshop

The BioCompute workshop will be held this Tuesday, Sept 13th. at 10:30am (Eastern). We have partnered with DNAnexus and Seven Bridges in developing new tools for building Biocompute Objects on their platforms, and Galaxy for deposit to the public access-controlled BioComputeDB. If you are interested in workflows and communicating bioinformatics pipelines this might be of interest to you. Register at https://www.eventbrite.com/e/building-biocompute-objects-on-three-popular-bioinformatics-platforms-tickets-404095038137

Working Group Updates

You can find a list of CFDE WGs and linked agendas on the Cross-Pollination Meeting Schedule. Currently scheduled working group meetings are as follow:	Working Group	Date	Time	Agenda
Knowledge Graph	Sep 20th	12pm PT / 3pm ET	Knowledge Graph WG
Ontology	Oct 5th	8am PT / 11am ET	Ontology WG

Welcome

4D Nucleome: Rahi Navelkar GlyGen: Jonathan Keeney

Contributing

You can contribute to the next announcements by commenting on the open announcements issue in this repository. Share your events and updates by posting links and descriptions in our announcements issue! If you have questions about these or other events/activities in the CFDE, contact our helpdesk at support@cfde.atlassian.net

Thank you all for your efforts and have a great week!