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A way for anyone in the group to quickly share announcements that are archived both in GitHub and our Announcements mailing list
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CFDE Announcements to Post 01-15-2024 #391

Closed jeremywalter closed 10 months ago

jeremywalter commented 10 months ago

To share your announcement:

  1. Add a comment containing your interesting links and announcements.
  2. Specify the heading where your post belongs (or add your own):
  1. Let us know if you would like your Announcements to be added to the Cross Pollination mailing list which includes Data Centers not onboarded with the CFDE
jeremywalter commented 10 months ago

New

The Undergraduate Student Internship Program provides the opportunity for undergraduate students from U.S. colleges and universities to receive mentorship and training from HuBMAP labs over the summer. Online applications are open and are due by February 1st, 2024. Download the flyer for more details.

Please note, I have attached an updated flyer to replace the old flyer (but I did not update the link in the text).

Please contact Richard or Dena for more details.

Thanks,

Chris

jeremywalter commented 10 months ago

Welcome

Foster Group: Lukasz Lacinski

jeremywalter commented 10 months ago

The highly anticipated NANS Annual Meeting is just around the corner and serves as a prime opportunity to engage with leading experts, discover cutting-edge research, and foster collaborations within the clinically focused neuroscience community. What can you do when you visit booth 412? View published neuromodulation datasets on the SPARC Portal. Discuss collaboration opportunities, Learn about current research projects and Get a demo of the research portal that bridges the body and the brain Also, plan to congratulate SPARC Researcher Dr. Pelot, who has been named a 2024 NANS Rising Star! See the research she has published on the SPARC Portal here.

jeremywalter commented 10 months ago

CFDE Announcements

March All-Hands Meeting

Save the date! The CFDE Program Team is pleased to announce we will be holding the annual CFDE Program Meeting on March 19-20, 2024 in Bethesda, MD. A website for the event has gone live with links for registration and hotel booking and will be updated with agenda information as plans come together. You can also join our event Slack channel #2024-march-meeting. If you have any questions about the March All-Hands Meeting, contact us at the helpdesk.

Cross-Pollination Meeting

The next Cross-Pollination meeting will take place on February 6th, 2024, at 2 pm ET/ 11 am PT. View the Cross-Pollination Schedule for more details. Email support@cfde.atlassian.net if you would like to present.

NANS Annual Meeting

Save the date for the most exciting event in neuromodulation innovation! Join the 2024 North American Neuromodulation Society (NANS) conference Jan 18-21 in Las Vegas for cutting-edge research, speakers, networking and innovations. NANS links patients, physicians and health care professionals, scientists, engineers, and industry to advance neuromodulation, drive multidisciplinary collaboration, enhance therapy awareness and inspire innovation to transform patients’ lives.

What can you do when you visit booth 412? View published neuromodulation datasets on the SPARC Portal. Discuss collaboration opportunities, Learn about current research projects and get a demo of the research portal that bridges the body and the brain. Also, plan to congratulate SPARC Researcher Dr. Pelot, who has been named a 2024 NANS Rising Star! See the research she has published on the SPARC Portal here.

4DN Hackathon

The 4D Nucleome program is accepting applications for the 2024 4DN Hackathon, which will be hosted at the University of Washington in Seattle, Washington from March 18-21st, 2024. The hackathon is open to all students, faculty, and staff from the general scientific community – no coding experience is required. This opportunity offers participants the chance to explore genome organization, build something novel, learn from peers, and get familiar with the 4DN program’s data and research! 40-50 applicants will be selected, and travel and accommodations will be completely supported. The deadline to apply is January 20th, 2024. Please direct all questions to: hack4dnucleome@gmail.com. Find more details and the application here: hack4dnucleome.github.io

"SenNet + HOA - Hacking the Human Vasculature in 3D" Kaggle Competition

The “SenNet + HOA - Hacking the Human Vasculature in 3D” Kaggle competition is now LIVE at https://www.kaggle.com/competitions/blood-vessel-segmentation. The aim of this competition is to solve a fundamental problem in at least one organ, and to develop a first understanding of what vascular scaffold is needed to map senescent cells in tissue regions. A total prize amount of $80,000 (sponsored by Kaggle, CIFAR, and Thermo Fisher Scientific) will be distributed among the five winning teams. You can join any time before January 30, 2024. Our welcome message here includes additional information and links. Please share this information widely! For questions, contact Nancy Ruschman: nruschma@iu.edu

GlyGen-CFDE Summer Internship Program

The GlyGen-CFDE project is seeking applications for a paid 8-week summer research in-person internship in 2024 for undergraduate and graduate students in Washington DC at George Washington University. This 8-week internship program is tailored to provide hands-on experience in bioinformatics and biology applications in biomedical research through Common Fund Data Ecosystem (CFDE) and GlyGen tools and data. Interns will have the opportunity to expand their understanding of biology, biochemistry, and bioinformatics concepts, including exploration and analysis of glycans, proteins, and biomarkers while working on tasks and projects, enabling them to find answers to specific biological questions. The internship will provide benefits such as professional networking, soft skills development, hands-on experience in bioinformatics programming, data wrangling, and exploration of biomedical web resources and tools.

Please visit the internship announcement for more details and to apply. The last date to apply is January 31, 2024.

SenNet Consortium Undergraduate Student Program (CUSP)

SenNet is actively recruiting students for the May-August 2024 cohort of the Consortium Undergraduate Student Program (CUSP). CUSP is a summer research internship program for undergraduate students hosted by laboratories participating in the NIH Common Fund’s Cellular Senescence Network (SenNet). The application deadline is January 25. Interested students can always reach out to [cusp@sennetconsortium.org] or visit https://sennetconsortium.org/internship/ for application information and eligibility requirements. We're looking forward to an excellent summer with the 2024 CUSP interns!

4DN Summer Internship Program

The 4DN Summer Undergraduate Program for Excellence in Research (SUPER) is seeking applications for a paid summer research internship for undergraduate students. Students will be hosted by labs participating in the 4DN program, studying the structure and function of the nucleus. The individual opportunities are experimental, computational or both in labs using genomics, imaging or both. The internship will provide an opportunity for students to build connections, gain scientific skills, and conduct research. NIH encourages the participation of individuals from populations that are underrepresented in the biomedical, clinical, behavioral and social sciences. See the Notice of NIH’s Interest in Diversity. Please visit the program announcement for more details and to apply. Inquiries or requests for more information should be directed to oh@4dnucleome.org.

HuBMAP Summer Internship Program

The Undergraduate Student Internship Program provides the opportunity for undergraduate students from U.S. colleges and universities to receive mentorship and training from HuBMAP labs over the summer. Online applications are open and are due by February 1st, 2024. Download the flyer for more details.

CFDE Funding Opportunities

Short Courses to Promote the Broad and Rigorous Use of Common Fund Data (R25 Clinical Trial Not Allowed)

CFDE is announcing the CFDE Research Education Program (RFA-RM-23-014), which aims to maximize the impact of these data and engage a broader community of end-users for wider adoption of Common Fund data sets. Applicants will develop a program that provides short courses on how to access, integrate, and interpret two or more Common Fund data sets in rigorous biomedical research designs, and mentoring activities to support the career development and retention of course trainees as long-term Common Fund data users.

Applications are due February 14, 2024, by 5:00 PM local time of the applicant organization.

More information can be found on the Common Fund Data Ecosystem website. Email Dr. Sahana Kukke at sahana.kukke@nih.gov with any additional questions.

Working Group Updates

You can find a list of CFDE WGs and linked agendas on the Cross-Pollination Meeting Schedule. Currently scheduled working group meetings are as follow: Working Group Date Time Agenda
Knowledge Graph February 20th 12pm PT / 3pm ET Knowledge Graph WG
Ontology February 21st 8am PT / 11am ET Ontology WG

C2M2 Submission Schedule

Submission Deadline Portal Update
Mar 15 Apr 1

Welcome

Foster Group: Lukasz Lacinski

Contributing

You can contribute to the next announcements by commenting on the open announcements issue in this repository. Share your events and updates by posting links and descriptions in our announcements issue! If you have questions about these or other events/activities in the CFDE, contact our helpdesk at support@cfde.atlassian.net.

Remember you can always contact the CFDE Helpdesk for any questions or concerns about anything CFDE related (including the content of this newsletter!)

Thank you all for your efforts and have a great week!