Closed jeremywalter closed 4 months ago
Registration is now open for the 2nd workshop in the IMPC Workshop series 2024, which is titled
‘IMPC Data API Workshop’
and is taking place online on Monday, the 20th May 2024 from 16:00-18:00 CET/ 15:00-17:00 UK /10:00-12:00 EDT/ 07:00-09:00 PDT.
The target audience for the workshop would be people familiar with mouse biology and IMPC data to some extent, with some basic knowledge of programming and data transformation, but not necessarily knowledge of using an Apache Solr API. The objective of the course would be to enable people to construct simple Solr API queries to obtain IMPC data based on an understanding of the structure of IMPC data, specifically how knowledge of IMPReSS can be used together with the Solr API to extract datasets from IMPC.
After the course people should be able to automate tasks that could be accomplished through the website by looking manually at multiple web pages.
More information on the workshop here
Registration is free here
Following registration, an email with the login details will be sent to you within a few hours.
Please also check you spam folder and let us know in case it was not received.
We are looking forward to welcoming you to this event!
A lot of work is going on to transfer coordination responsibilities from the old CC to the new ICC. Many systems and platforms will be changing hands and new meeting invites will be issued for CFDE meetings starting in May. Please keep an eye out for new invitations as the Zoom links and Calendar invitations will be new. Thank you for your patience and understanding as we work on the transition to Phase II of the CFDE!
Registration is now open for the 2nd workshop in the IMPC Workshop series 2024. It is taking place online on Monday, May 20th 2024 from 16:00-18:00 CET/ 15:00-17:00 UK /10:00-12:00 EDT/ 07:00-09:00 PDT.
The target audience for the workshop would be people familiar with mouse biology and IMPC data to some extent, with some basic knowledge of programming and data transformation, but not necessarily knowledge of using an Apache Solr API. The objective of the course would be to enable people to construct simple Solr API queries to obtain IMPC data based on an understanding of the structure of IMPC data, specifically how knowledge of IMPReSS can be used together with the Solr API to extract datasets from IMPC. After the course people should be able to automate tasks that could be accomplished through the website by looking manually at multiple web pages.
More information on the workshop here Registration is free here
Many CFDE Members joined us for our Cloud Workspace Pilot breakout session at the All-Hands Meeting in Bethesda. Please check out details about the CWP session along with links to the posters we presented at https://kids-first.github.io/cloud-workspace-partnership-pilot/ and find more information at the CWP website: https://github.com/kids-first/cloud-workspace-partnership-pilot. We would be happy to answer any questions about how to get started on CAVATICA or how to apply for the $1,000 (leading to $5000) in funding for the CWP. Please also let us know how we can improve for the next workshop. Please reach out to the CWP team by email or on CFDE Slack for assistance: Surya Saha, Eric Wenger, Sangeeta Shukla, Eric Tobin
The CF is announcing a funding opportunity (OTA-24-005) to establish the Cloud Workspace Implementation Center (CWIC) for the Common Fund Data Ecosystem (CFDE). The CWIC will create a synergistic cloud workspace that enables users to import their data and co-analyze them together with other Common Fund data sets. The cloud workspace will also enable the use of CFDE-constructed pipelines, workflows, and other analysis and visualization resources. It will meet the needs of both novice and expert users.
More information can be found on the Common Fund Data Ecosystem website. Email Dr. Anthony Kirilusha at anthony.kirilusha@nih.gov and CFDE@od.nih.gov with any additional questions.
Applications are due April 22, 2024, by 5:00 PM local time of the applicant organization.
The NIH Common Fund (CF) is requesting research applications (RFA-RM-24-006) encouraging the use of Common Fund data. To be eligible, the proposed research must substantially leverage data from at least two Common Fund programs (a full list of eligible Common Fund data sets is available below).
Email Dr. Anthony Kirilusha at anthony.kirilusha@nih.gov and Dr. George Papanicolaou at george.papanicolaou@nih.gov with any additional questions. Please note that Early Stage Investigators (ESI) are encouraged to apply, as receipt of an R03 award does not impact ESI status.
Applications are due June 27, 2024, by 5:00 PM local time of applicant organization.
The New Innovator Award supports exceptionally creative early stage investigators proposing highly innovative and high-impact projects. The New Innovator Award has the following characteristics:
Single-PI applications only - PI must have Early Stage Investigator status - No preliminary data required - $1.5 million in direct costs disbursed in two multi-year-funded segments of three-years and two-years
PHS 2590 Non-Competing Continuation Progress Report (not a Multi-Year Funded Research Performance Progress Report (RPPR)) must be submitted in year three for funding the second award segment. Detailed Budget pages must be completed according to the special instructions in the funding opportunity announcement
See the New Innovator Award website for more information, including FAQs and an application guide with sample applications. Prospective applicants are invited to a pre-application webinar on June 25, 2024, from 2:00-3:30 PM ET. NIH staff will discuss the initiative and answer questions about the application and review process. Questions for the webinar should be submitted ahead of time to NewInnovatorAwards@mail.nih.gov by 11:59 PM local time on June 20, 2024. Additional questions may be taken during the webinar if time allows. Register for the webinar and join on Webex. The webinar will be recorded and posted on the New Innovator Award website.
Applications due August 19, 2024
The Transformative Research Award supports individuals or teams proposing groundbreaking, exceptionally innovative, original, and/or unconventional research with the potential to create new scientific paradigms, establish new and improved clinical approaches, or develop transformative technologies. The Transformative Research Award has the following characteristics:
Open to all career stages - Accepts single-PI or multi-PI applications - No preliminary data or detailed experimental plan required - Anonymized Specific Aims page and Research Strategy section - Flexible budget
The Transformative Research Award initiative is piloting an anonymized review process. Applicants should carefully read and follow the instructions in the funding opportunity to ensure responsiveness.
See the Transformative Research Award website for more information, including FAQs and an application guide with sample applications. Prospective applicants are invited to a pre-application webinar on June 26, 2024, from 3:30-5:00 PM ET. NIH staff will discuss the initiative and answer questions about the application and review process. Questions for the webinar should be submitted ahead of time to Transformative_Awards@mail.nih.gov by 11:59 PM local time on June 21, 2024. Additional questions may be taken during the webinar if time allows. Register for the webinar and join on Webex. The webinar will be recorded and posted on the Transformative Research Award website.
Application deadline: September 3, 2024
The Early Independence Award enables rigorous and promising early career investigators to bypass the traditional postdoctoral training period and launch an independent research career. Applicants must have recently completed or will soon complete their doctoral degree or clinical training and have the support and guarantee of an independent research position from a host institution.
Single-PI applications only - Complete doctoral degree or clinical training between May 1, 2023, and September 30, 2025 - In non-independent research position at time of application - Cannot have served in a postdoctoral position for more than 12 months before completion of terminal doctoral degree or clinical training - Requires significant institutional commitment - Limited to two applications per institution - No preliminary data required - Up to $250,000 direct costs per year for up to 5 years
See the Early Independence Award website for more information, including FAQs and an application guide with sample applications. Prospective applicants are invited to a pre-application webinar on June 26, 2024, from 1:00-2:30 PM ET. NIH staff will discuss the initiative and answer questions about the application and review process. Questions for the webinar should be submitted ahead of time to EarlyIndependence@od.nih.gov by 11:59 PM local time on June 21, 2024. Additional questions may be taken during the webinar if time allows. Register for the webinar and join on Webex. The webinar will be recorded and posted on the Early Independence Award website.
Application deadline: September 6, 2024
The Pioneer Award supports scientists with outstanding records of creativity proposing pioneering approaches to major challenges in any area of science relevant to the broad mission of NIH. The Pioneer Award has the following characteristics:
Open to all career stages - Single-PI applications only - No preliminary data required - Must be new scientific research direction - $700,000 direct costs per year for 5 years
See the Pioneer Award website for more information, including FAQs and an application guide with sample applications. Prospective applicants are invited to a pre-application webinar on June 25, 2024, from 12:00-1:30 PM ET. NIH staff will discuss the initiative and answer questions about the application and review process. Questions for the webinar should be submitted ahead of time to PioneerAwards@mail.nih.gov by 11:59 PM local time on June 20, 2024. Additional questions may be taken during the webinar if time allows. Register for the webinar and join on Webex. The webinar will be recorded and posted on the Pioneer Award website.
Application deadline: September 9, 2024
We are currently recruiting for a fully paid Master’s in Data Science Fellowship.
This opportunity allows students to earn an MPS degree in data science while earning a full stipend to work at CARD with real-world data in the dementia space, working to explore the genetic architecture of disease from a data science perspective. This program is a collaboration with NIH FAES and UMBC. We are particularly passionate about recruiting diverse fellows. We have a blog post featuring interviews with current MPS in Data Science Fellows at CARD – students can learn what it’s like to be in the program: https://card.nih.gov/news-events/card-news/what-its-be-masters-data-science-student-nih-card. Prospective fellows can learn more about this opportunity and apply here: https://faes.org/CARD-FAES-UMBC_Fellowship.
The application deadline is the end of the day on April 22, 2024.
You can find a list of CFDE WGs and linked agendas on the Cross-Pollination Meeting Schedule. Currently scheduled working group meetings are as follow: | Working Group | Date | Time | Agenda |
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Knowledge Graph | May 21st | 12pm PT / 3pm ET | Knowledge Graph WG | |
Ontology | TBD | 8am PT / 11am ET | Ontology WG |
Submission Deadline | Portal Update |
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TBD
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