nih-cfde / ontologyWG

1 stars 0 forks source link

synapse/synaptosome term for Daniel Lyman #6

Open mgiglio99 opened 2 years ago

mgiglio99 commented 2 years ago

Good afternoon Michelle,

We would like to request a new term; 'synaptosome' or, alternatively, ‘synapse’ as descriptor for data on N-glycans and glycoproteins in synaptosomal preparations (e.g., PMID: 34106099).

Our main problem is identifying a satisfactory placement of 'synaptosome' in a current CFDE terminology. OBI might be suitable for 'synaptosome', though OBI seems more concerned with assays. Alternatively, Uberon may be appropriate for ‘synapse’.

For assorted reasons (e.g., parent definitions, siblings, granularity), no entirely satisfactory placement of either term was identified in either structure; although possible parents were provisionally identified.

Your recommendations for the requested term would be very greatly appreciated.

A summary of our analysis is provided at https://docs.google.com/spreadsheets/d/1bnmps9Q48zK2b_0AIyNKQnXJCCVmVPPl/edit?usp=sharing&ouid=105494728127626388606&rtpof=true&sd=true


Hi Michelle,

I’ve moved our files concerning request for a new term 'synaptosome' or ‘synapse’ to a Gdrive at https://drive.google.com/drive/u/1/folders/1d1T1xFhjSmz48GDZ-0H99NRWQDdQ55Qu

Comments can be made directly in the files at the link and are greatly appreciated. Thanks very much, all. Regards,

Dan

@nsuvarnaiari

mgiglio99 commented 2 years ago

@nsuvarnaiari