Open LinaTeichmann1 opened 1 year ago
Yeah - I have run into this already. Like you mentioned the trans_mats folder can be deleted to have the process continue on. Alternatively - I can build out that folder to be more "bids" like and have a subj/session folder structure.
I can look into it.
Hi @jstout211,
I was trying to run make_meg_bids.py for data acquired in multiple sessions. Everything works fine for the MEG data, however, it is also trying to make an "anat" folder in every session folder. This part fails as soon as you get to session 2 because the files for that same participant exist already in the bids_prep_temp folder. I wonder whether it would make sense to either copy over the "anat" folder to all sessions or have anat outside of each session folder? Or is there a way to add a flag so it ignores that there is a duplicate file?
Thanks, Lina :)
EDIT: actually now that I'm thinking about it, copying wouldn't make sense because the electrode files are different right? So maybe we'll just need to delete the bids_prep_temp folder after every session?