Closed ArturAkh closed 3 years ago
Merging #132 (f170e23) into main (548e2c0) will decrease coverage by
0.23%
. The diff coverage is0.00%
.
@@ Coverage Diff @@
## main #132 +/- ##
==========================================
- Coverage 56.54% 56.30% -0.24%
==========================================
Files 23 23
Lines 1505 1506 +1
==========================================
- Hits 851 848 -3
- Misses 654 658 +4
Impacted Files | Coverage Δ | |
---|---|---|
b2luigi/batch/processes/gbasf2.py | 37.74% <0.00%> (-0.83%) |
:arrow_down: |
Continue to review full report at Codecov.
Legend - Click here to learn more
Δ = absolute <relative> (impact)
,ø = not affected
,? = missing data
Powered by Codecov. Last update 548e2c0...f170e23. Read the comment docs.
Thanks, I took some time to look at this PR and looks good to me. Small reminder, I still prefer if you could create a separate named feature branch before opening the PR, this makes some git stuff less cumbersome :wink:
Thanks to you making this editable I did two minor changes which I thought don't require much discussions:
filepath.replace(...)
is a bit dangerous, because it replaces all occurances of a string in the file path, e.g. if a super-directory would have failed_files
as part of its name. Unlikely, but better just use os.path.splitext
to add a suffix to the part of the filepath before the .txt
with open(...)
instead of open.readlines()
directly to explicilty free resources instead of letting the garbage collector do that. I used the one-liner myself in the past, but now I saw in the internet that the with-version is more recommended.I just pushed these directly to your main
branch and think I will merge if it passes the tests.
Hi @meliache thanks a lot for reviewing and fixing the pull request. I totally support your changes :)
And sorry for working on my main branch :D bad habbit ;)
This pull request updates the behaviour of b2luigi in case of failed downloads from gbasf2 tasks and addresses the issue #130.
In the newest gbasf2 release v5r1p3, the option
--failed_lfns
becomes available to pass lfns of failed downloads to a text file. This allows to avoid parsing ofstdout
of the tool, which could lead to errors.Since the format of the file created by
--failed_lfns
is exactly as required by--input_dslist
in the subsequent download, no additional tests are needed. Therefore, all tests related to failed downloads are removed.