In pipeline.py, need a function to rename corrupt volume DICOM directory in scans.tsv

nimh-dsst / abcd-fasttrack2bids

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Closed ericearl closed 2 months ago

ericearl commented 3 months ago

Currently comes out as the format:

/lscratch/${SLURM_JOB_ID}/sub-${SUBJECT}_ses-${SESSION}/DICOM/sub-${SUBJECT}/ses-${SESSION}/func/ABCD-SST-fMRI_run-YYYYMMDDHHMMSS

ericearl commented 2 months ago

Fixed with 92920a9.