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nipreps
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fmriprep-rodents
fMRIPrep for Rodents
Apache License 2.0
12
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7
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CI: add Docker local registry
#56
eilidhmacnicol
closed
1 year ago
1
ENH: SDC integration
#55
eilidhmacnicol
opened
1 year ago
0
Docker overhaul
#54
eilidhmacnicol
closed
1 year ago
8
Maint: docker overhaul
#53
eilidhmacnicol
closed
1 year ago
0
fMRIPrep generalizations (m1-12)
#52
esavary
opened
1 year ago
0
FIX: No BOLD images found for participant
#51
Hyedryn
opened
1 year ago
1
RuntimeError: No BOLD images found for participant <001> and task <all>
#50
Hyedryn
opened
1 year ago
0
MAINT: Rotate CircleCI secrets and setup up org-level context
#49
oesteban
closed
1 year ago
1
Duplicate node name error
#48
LenaDorfschmidt
opened
2 years ago
7
maint: docker and dependency overhaul
#47
eilidhmacnicol
closed
2 years ago
4
Singularity: No space left on device
#46
Hierakonpolis
opened
2 years ago
7
FIX: add fast basescale args
#45
eilidhmacnicol
closed
2 years ago
0
FIX: anatomical discrete segmentation improvements
#44
eilidhmacnicol
closed
2 years ago
1
MAINT: Test pulling if there's no cache
#43
oesteban
closed
2 years ago
0
MAINT: Revise ``Dockerfile`` and update for new CircleCI subscription
#42
oesteban
closed
2 years ago
0
Version Error When Running Docker Image
#41
lassestahnke
closed
2 years ago
2
ENH: reference workflow N4 improvements
#40
eilidhmacnicol
closed
2 years ago
0
FIX: Cleanup dependencies
#39
oesteban
closed
2 years ago
0
ENH: reference workflow 2.0
#38
eilidhmacnicol
closed
2 years ago
5
RF: remove neurodebian
#37
eilidhmacnicol
closed
2 years ago
2
maint: niworkflows 1.4.x compatibility
#36
eilidhmacnicol
closed
2 years ago
4
Reference workflow integration
#35
eilidhmacnicol
closed
2 years ago
0
Orientation - flag or detection?
#34
eilidhmacnicol
opened
3 years ago
0
Do not run artsBrainExtraction twice - fast BOLD reference masking
#33
oesteban
closed
2 years ago
3
Do we want user tracking? Should we stick with Sentry or maybe try Popylar?
#32
oesteban
opened
3 years ago
0
MAINT: Upgrade ANTs to 2.3.3 in Docker images
#31
oesteban
closed
3 years ago
0
ENH: Quick revision of Dockerfile
#30
oesteban
closed
3 years ago
1
MAINT: Change packagename to ``fprodents``, keep distribution name
#29
oesteban
closed
3 years ago
1
Migrate project over to NiPreps
#28
oesteban
closed
2 years ago
0
Calculate FD from ``3dVolReg`` output parameters
#27
oesteban
opened
3 years ago
0
Workflow "figure 1" in README
#26
oesteban
opened
3 years ago
0
Fix: adjust csf erosion
#25
eilidhmacnicol
closed
3 years ago
0
Default derivatives output folder should be "fmriprep" instead of "fmriprep_rodents"
#24
oesteban
closed
3 years ago
1
Rename package to "fprodents"?
#23
oesteban
closed
3 years ago
5
FIX: final workflow changes
#22
eilidhmacnicol
closed
3 years ago
0
FIX: Strip out surface-related processing
#21
oesteban
closed
3 years ago
1
MAINT: Run ``black`` on the whole repo and fix PEP8 errors
#20
oesteban
closed
3 years ago
1
DOC: Update README
#19
oesteban
closed
3 years ago
0
MAINT: Relicense as Apache-2.0
#18
oesteban
closed
3 years ago
0
MAINT: Set-up GH Actions to check packaging and linting
#17
oesteban
closed
3 years ago
0
MAINT: Migrate testdata to nipreps-data and remove docker-wrapper
#16
oesteban
closed
3 years ago
1
ENH: Replace MCFLIRT with 3dVolReg
#15
mgxd
closed
3 years ago
1
FIX: functional workflow
#14
eilidhmacnicol
closed
3 years ago
4
Fix functional workflow
#13
eilidhmacnicol
closed
3 years ago
0
Finalizing anatomical processing
#12
mgxd
closed
3 years ago
5
FIX: Avoid fetching single hemisphere masks
#11
mgxd
closed
3 years ago
0
ENH: Functional workflow
#10
mgxd
closed
4 years ago
1
CI: Mark anat derivatives as artifacts
#9
mgxd
closed
4 years ago
1
Add sample data to CircleCI
#8
mgxd
closed
4 years ago
1
WIP: Bring nirodents brain extraction to anatomical preprocessing
#7
mgxd
closed
4 years ago
3
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