Running only functionals

nipreps / fmriprep

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

https://fmriprep.org

Apache License 2.0

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Running only functionals #755

Open oesteban opened 6 years ago

oesteban commented 6 years ago

A good option to have would be running FMRIPREP without T1w images under two possible circumstances:

The dataset does not have T1w images
The user set a flag --dismiss-t1w to force dismissing the anatomical processing.

(comes from this discussion)