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nipreps / mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
http://mriqc.readthedocs.io
Apache License 2.0
299 stars 132 forks source link

Thanks for the improved group reports! #1003

Closed dkp closed 2 years ago

dkp commented 2 years ago

MRIqc is such an important tool. I'm delighted to see the update and improvements. WRT the legends, I'm assuming Ctx GM=cortical GM, dGM is deep GM, what is Crown??

Thanks so much

psadil commented 2 years ago

@dkp, I'm not a developer but was wondering the same. For future reference, the crown appears to refer to a shell around the brain mask with thickness of 2 voxels. See https://osf.io/hz52v/ and https://www.liebertpub.com/doi/full/10.1089/brain.2014.0321

effigies commented 2 years ago

Yes, that's correct.

dkp commented 2 years ago

Thanks so much! Very helpful.