Skip BOLD files with too few volumes

nipreps / mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

http://mriqc.readthedocs.io

Apache License 2.0

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Skip BOLD files with too few volumes #1090

Closed effigies closed 7 months ago

effigies commented 1 year ago

What would you like to see added in this software?

Runs with 4 or fewer time points will raise an error at the motion_correct node. This should be detected at workflow creation time and skipped.

xref https://github.com/poldracklab/tacc-openneuro/issues/58

Do you have any interest in helping implement the feature?

Yes

Additional information / screenshots

No response

dzemanov commented 10 months ago

Hello, is there any update on this? We have some runs that are failing on < 5 time points per voxel and would love if the whole mriqc run didn't fail because of them.

oesteban commented 7 months ago

Resolved with #1120 in https://github.com/nipreps/mriqc/commit/f39c4bf7bb51bdfc19f9f4872f1da28385ff6254