Running group produces "KeyError: 'dwi'"

[jbwexler]

What happened?

The group reports are still created but it produces the error below. This occurred on two separate datasets.

What command did you use?

mriqc /corral-repl/utexas/poldracklab/data/OpenNeuro/raw/ds001555 . group -w /corral-repl/utexas/poldracklab/data/OpenNeuro/mriqc/work/ds001555

What version of the software are you running?

23.1.0

How are you running this software?

Other

Is your data BIDS valid?

No

Are you reusing any previously computed results?

No

Please copy and paste any relevant log output.

> Traceback (most recent call last):
>   File "/work2/03201/jbwexler/frontera/anaconda3/envs/mriqc/bin/mriqc", line 8, in <module>
>     sys.exit(main())
>   File "/work2/03201/jbwexler/frontera/anaconda3/envs/mriqc/lib/python3.10/site-packages/mriqc/cli/run.py", line 206, in main
>     dataframe, out_tsv = generate_tsv(output_dir, mod)
>   File "/work2/03201/jbwexler/frontera/anaconda3/envs/mriqc/lib/python3.10/site-packages/mriqc/utils/misc.py", line 181, in generate_tsv
>     jsonfiles = list(output_dir.glob("sub-*/**/%s/sub-*_%s.json" % (IMTYPES[mod], mod)))
> KeyError: 'dwi'

Additional information / screenshots

No response

[araikes]

Probably related to #1125

[askieslinger]

I am also running into this error and I don't even have any dwi data.

[oesteban]

Was this not fixed by #1148?

[celprov]

@oesteban yes it should be resolved.

[abfeld007]

Hi I am running MRI v23.1.0, but I still got the 'dwi' error when I am not using any DWI files (and my dataset passed the bids validator).

Traceback (most recent call last): File "/opt/homebrew/bin/mriqc", line 8, in sys.exit(main()) ^^^^^^ File "/opt/homebrew/lib/python3.11/site-packages/mriqc/cli/run.py", line 206, in main dataframe, out_tsv = generate_tsv(output_dir, mod) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/opt/homebrew/lib/python3.11/site-packages/mriqc/utils/misc.py", line 181, in generate_tsv jsonfiles = list(outputdir.glob("sub-*/*/%s/sub-%s.json" % (IMTYPES[mod], mod)))

KeyError: 'dwi'