Closed oesteban closed 3 months ago
Implements @effigies' solution leveraging Docker multi-staged builds.
Checked linked libraries within the Docker container:
$ ldd /usr/local/bin/dwidenoise linux-vdso.so.1 (0x00007fff6db65000) libmrtrix.so => /usr/local/bin/../lib/libmrtrix.so (0x00007f4e2b757000) libstdc++.so.6 => /opt/conda/lib/libstdc++.so.6 (0x00007f4e2b574000) libm.so.6 => /usr/lib/x86_64-linux-gnu/libm.so.6 (0x00007f4e2b48d000) libgcc_s.so.1 => /opt/conda/lib/libgcc_s.so.1 (0x00007f4e2b472000) libpthread.so.0 => /usr/lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f4e2b46d000) libc.so.6 => /usr/lib/x86_64-linux-gnu/libc.so.6 (0x00007f4e2b242000) /lib64/ld-linux-x86-64.so.2 (0x00007f4e2bac2000) libz.so.1 => /opt/conda/lib/libz.so.1 (0x00007f4e2b227000) libtiff.so.5 => /usr/lib/x86_64-linux-gnu/libtiff.so.5 (0x00007f4e2b19f000) libpng16.so.16 => /opt/conda/lib/libpng16.so.16 (0x00007f4e2b162000) librt.so.1 => /usr/lib/x86_64-linux-gnu/librt.so.1 (0x00007f4e2b15d000) libwebp.so.7 => /opt/conda/lib/libwebp.so.7 (0x00007f4e2b0bb000) libzstd.so.1 => /opt/conda/lib/libzstd.so.1 (0x00007f4e2afa7000) liblzma.so.5 => /opt/conda/lib/liblzma.so.5 (0x00007f4e2af7e000) libjbig.so.0 => /usr/lib/x86_64-linux-gnu/libjbig.so.0 (0x00007f4e2af6d000) libjpeg.so.8 => /opt/conda/lib/libjpeg.so.8 (0x00007f4e2ae87000) libdeflate.so.0 => /opt/conda/lib/libdeflate.so.0 (0x00007f4e2ae71000) libsharpyuv.so.0 => /opt/conda/lib/./libsharpyuv.so.0 (0x00007f4e2ae65000) ldd /usr/local/lib/libmrtrix.so linux-vdso.so.1 (0x00007ffc0a0b6000) libz.so.1 => /opt/conda/lib/libz.so.1 (0x00007f431b203000) libtiff.so.5 => /usr/lib/x86_64-linux-gnu/libtiff.so.5 (0x00007f431b17b000) libpng16.so.16 => /opt/conda/lib/libpng16.so.16 (0x00007f431b13e000) libstdc++.so.6 => /opt/conda/lib/libstdc++.so.6 (0x00007f431af5b000) libm.so.6 => /usr/lib/x86_64-linux-gnu/libm.so.6 (0x00007f431ae74000) libgcc_s.so.1 => /opt/conda/lib/libgcc_s.so.1 (0x00007f431ae57000) libpthread.so.0 => /usr/lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f431ae52000) libc.so.6 => /usr/lib/x86_64-linux-gnu/libc.so.6 (0x00007f431ac29000) /lib64/ld-linux-x86-64.so.2 (0x00007f431b4d5000) libwebp.so.7 => /opt/conda/lib/libwebp.so.7 (0x00007f431ab89000) libzstd.so.1 => /opt/conda/lib/libzstd.so.1 (0x00007f431aa75000) liblzma.so.5 => /opt/conda/lib/liblzma.so.5 (0x00007f431aa4c000) libjbig.so.0 => /usr/lib/x86_64-linux-gnu/libjbig.so.0 (0x00007f431aa39000) libjpeg.so.8 => /opt/conda/lib/libjpeg.so.8 (0x00007f431a953000) libdeflate.so.0 => /opt/conda/lib/libdeflate.so.0 (0x00007f431a93d000) librt.so.1 => /usr/lib/x86_64-linux-gnu/librt.so.1 (0x00007f431a938000) libsharpyuv.so.0 => /opt/conda/lib/./libsharpyuv.so.0 (0x00007f431a92e000)
And also tested MRIQC locally on DWI data.
Resolves: #1175.
Implements @effigies' solution leveraging Docker multi-staged builds.
Checked linked libraries within the Docker container:
And also tested MRIQC locally on DWI data.
Resolves: #1175.