nipreps / niworkflows

Common workflows for MRI (anatomical, functional, diffusion, etc)
https://www.nipreps.org/niworkflows
Apache License 2.0
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Overhaul of the carpet plots #665

Open oesteban opened 2 years ago

oesteban commented 2 years ago

We need several improvements to be done to the carpet plots:

effigies commented 2 years ago

For colorblindness, I would default to Seaborn's colorblind palette: https://seaborn.pydata.org/tutorial/color_palettes.html#qualitative-color-palettes

And here's a gist with simulated contrasts under different colorblindness conditions: https://gist.github.com/mwaskom/b35f6ebc2d4b340b4f64a4e28e778486

I believe we need 7 colors if we move to CIFTI and splitting the aCompCor mask out of WM+CSF: crown, lh, rh, subcortical, cerebellum, WM+CSF-aCompCor, aCompCor