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nipreps / smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
https://nipreps.github.io/smriprep
Apache License 2.0
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Surface reconstruction failure #19

Open chrisgorgo opened 6 years ago

chrisgorgo commented 6 years ago

image

Could be poor data or INU failure. sub-12

oesteban commented 6 years ago

Check the dataset and see if the T1 is unusable.

oesteban commented 6 years ago

This is still happening. My impression is that the bias field is not completely removed with N4.

https://s3.amazonaws.com/fmriprep/ds000116/fmriprep/sub-12.html