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nipy / PySurfer

Cortical neuroimaging visualization in Python
https://pysurfer.github.io/
BSD 3-Clause "New" or "Revised" License
240 stars 97 forks source link

surfer library error (gablab neuroimaging) #144

Closed centanni closed 8 years ago

centanni commented 8 years ago

Hello all, I'm getting this error that seems to be part of the surfer library. Any thoughts on how to troubleshoot? Thanks!!

//////////// task001: zstat01 //////////// Traceback (most recent call last): File "l2_screenshots.py", line 91, in take_screenshots(tasks ,contrasts, l2_path, model) File "l2_screenshots.py", line 17, in take_screenshots contrast_lh=project_volume_data(zstat,"lh",subject_id=template,smooth_fwhm=0.3) File "/om/project/ran/env/ran_py/lib/python2.7/site-packages/surfer/io.py", line 179, in project_volume_data env = dict(line.split('=', 1) for line in envout.split('\n') if line) ValueError: dictionary update sequence element #73 has length 1; 2 is required X Error of failed request: GLXBadContextTag Major opcode of failed request: 150 (GLX) Minor opcode of failed request: 5 (X_GLXMakeCurrent) Serial number of failed request: 458 Current serial number in output stream: 458

effigies commented 8 years ago

This seems to be a consequence of #132. Can you give the branch in #149 a try?

Sorry about the slow response.