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nipy / mindboggle

Automated anatomical brain label/shape analysis software (+ website)
http://mindboggle.info
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Naming the input image for mindboggle #137

Closed fuzhenrong closed 6 years ago

fuzhenrong commented 6 years ago

i have tried the one command process successful. but one problem confused me is that the input image must be T1? i have try to change the input image name as T3, it is got errors! why? if i want to processing different images, what should i do!

binarybottle commented 6 years ago

Mindboggle takes as input MRI data such as T1s that have been processed by FreeSurfer and ANTs, unless you are using the individual functions in the Python or C++ libraries. You are welcome to use any name for a file that goes into FreeSurfer and use the appropriate subject name when using Mindboggle.

binarybottle commented 6 years ago

@fuzhenrong -- was my response clear, or do you need further assistance?