Open iamjoostjanssen opened 7 years ago
I believe the only two inputs to the extract_fundi() function that need to be addressed to accomplish your task are folds
and depth_file
.
To generate gyral crowns instead of sulci, I believe you would simply change the following line in the extract_folds() function from:
indices_deep = [i for i,x in enumerate(depths) if x >= depth_threshold]
to:
indices_deep = [i for i,x in enumerate(depths) if x < depth_threshold]
To generate crown lines instead of fundi, you might be able to get away with simply reversing the depths
(depth values) in the extract_fundi() function.
Please give it a try and report back to us!
Hi,
This is a request. Perhaps the fundi script can somehow be tweaked to achieve this. If anybody has pointers let me know.
Thnx