Git issue on 32bit bot stops dipy installation early

[Garyfallidis]

http://nipy.bic.berkeley.edu/builders/dipy-bdist32-27/builds/301

STDIO output using PTY: False

:738: trailing whitespace. candidates for this list. :1064: trailing whitespace. :1097: trailing whitespace. :1139: trailing whitespace. :1156: trailing whitespace. error: patch failed: .mailmap:29 error: .mailmap: patch does not apply error: patch failed: .travis.yml:21 error: .travis.yml: patch does not apply error: COPYING: does not exist in index error: patch failed: Changelog:35 error: Changelog: patch does not apply error: patch failed: MANIFEST.in:1 error: MANIFEST.in: patch does not apply error: doc/source/_static/nibabel.css: does not exist in index error: doc/source/_templates/indexsidebar.html: does not exist in index error: doc/source/conf.py: does not exist in index error: doc/source/devel/advanced_testing.rst: does not exist in index error: doc/source/devel/devguide.rst: does not exist in index error: doc/source/devel/index.rst: does not exist in index error: doc/source/devel/make_release.rst: does not exist in index error: doc/source/dicom/dcm2nii_algorithms.rst: does not exist in index error: doc/source/gettingstarted.rst: does not exist in index error: doc/source/images_and_memory.rst: does not exist in index error: doc/source/index.rst: does not exist in index error: doc/source/installation.rst: does not exist in index error: doc/source/links_names.txt: does not exist in index error: doc/source/nibabel_images.rst: does not exist in index error: doc/source/nifti_images.rst: does not exist in index error: doc/sphinxext/docscrape.py: already exists in index error: doc/sphinxext/docscrape_sphinx.py: already exists in index error: doc/sphinxext/math_dollar.py: already exists in index error: doc/sphinxext/numpydoc.py: already exists in index error: nibabel/__init__.py: does not exist in index error: nibabel/externals/six.py: does not exist in index error: nibabel/fileholders.py: does not exist in index error: nibabel/freesurfer/mghformat.py: does not exist in index error: nibabel/freesurfer/tests/test_mghformat.py: does not exist in index error: nibabel/gifti/gifti.py: does not exist in index error: nibabel/gifti/parse_gifti_fast.py: does not exist in index error: nibabel/gifti/tests/test_parse_gifti_fast.py: does not exist in index error: nibabel/info.py: does not exist in index error: nibabel/nicom/dicomwrappers.py: does not exist in index error: nibabel/nicom/tests/test_csareader.py: does not exist in index error: nibabel/nicom/tests/test_dicomreaders.py: does not exist in index error: nibabel/nicom/tests/test_dicomwrappers.py: does not exist in index error: nibabel/nicom/tests/test_utils.py: does not exist in index error: nibabel/openers.py: does not exist in index error: nibabel/testing/**init**.py: does not exist in index error: nibabel/tests/test_fileholders.py: does not exist in index error: nibabel/tests/test_nifti1.py: does not exist in index error: nibabel/tests/test_round_trip.py: does not exist in index error: nibabel/tests/test_tripwire.py: does not exist in index error: nibabel/trackvis.py: does not exist in index error: nibabel/tripwire.py: does not exist in index error: nibabel/xmlutils.py: does not exist in index error: nisext/py3builder.py: does not exist in index error: patch failed: requirements.txt:1 error: requirements.txt: patch does not apply error: patch failed: setup.py:89 error: setup.py: patch does not apply

[Garyfallidis]

Same issue now on Python 3.3 http://nipy.bic.berkeley.edu/builders/dipy-bdist32-33/builds/208

[matthew-brett]

It looks like you're trying to run a try_branch.py run from the wrong repository, or where the repository is on a branch that is massively out of date. Is that possible?

[matthew-brett]

Specifically it looks like you're trying to run try_branch.py from the nibabel repository.

[Garyfallidis]

I am definitely not doing that personally. But maybe some of the other devs is doing so. @omarocegueda, @arokem, @marccote... Is it you guys?

[omarocegueda]

I'm currently not using try_branch. I'm trying to reproduce the Appveyor reported failure on a virtual machine... no luck so far =(

[arokem]

It's not me. @omarcegueda: thanks for putting the time in that. It's a real annoying one - it seems intermittent too. For example, it passed just 3 days ago, when I rebased that branch: https://ci.appveyor.com/project/arokem/dipy/build/1.0.584

On Thu, Jan 14, 2016 at 11:58 AM, Omar Ocegueda notifications@github.com wrote:

I'm currently not using try_branch. I'm trying to reproduce the Appveyor reported failure on a virtual machine... no luck so far =(

— Reply to this email directly or view it on GitHub https://github.com/nipy/nibotmi/issues/25#issuecomment-171762856.

[matthew-brett]

If y'all need to log into any of the buildbots directly, let me know.

[MarcCote]

Sorry guys, it was probably me. Yesterday, Matthew gave me access to the buildbot so I could debug a MemoryError of my nibabel's PR. I wasn't sure how to use try_branch.py and just pasted what Matthew sent me by email for the name of the bot. It tried to run a Nibabel patch on dipy-bdist32-27 !

Edit: However, it only happened once yesterday. Edit2: I have nothing to do with the error on dipy-bdist32-33 though.

[matthew-brett]

Oops - my fault for sending the wrong builder name...

[matthew-brett]

dipy-bdist32-33 error is something unrelated, not sure what caused it, I deleted the relevant directory and just reran the build: http://nipy.bic.berkeley.edu/builders/dipy-bdist32-33/builds/210

[matthew-brett]

Meanwhile original buildbot has rerun its nightly build without error : http://nipy.bic.berkeley.edu/builders/dipy-bdist32-27/builds/303

So I think this issue can be closed.