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nipype / pydra

Pydra Dataflow Engine
https://nipype.github.io/pydra/
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pydra interface packages from nipype 1 #170

Open satra opened 4 years ago

satra commented 4 years ago

we should perhaps chat about the next steps are for trying to convert an interface to pydra input/output specs and seeing which ones will require manual overrides. this will likely require work on nipype and pydra, especially if we are to be able to eventually do a nipype1to2 script.

we should also chat about:

i think two of the easier ones to convert would be Slicer and BrainsTools, since they already have formal specification of inputs and outputs.

cc: @djarecka @hjmjohnson

hjmjohnson commented 4 years ago

@satra When would you like to discuss this?

Hans

satra commented 4 years ago

@hjmjohnson - i can chat this fri at 4pm ET if it works for everyone.

djarecka commented 4 years ago

works for me

satra commented 4 years ago

pinging @oesteban and @effigies

effigies commented 4 years ago

:+1: Works for me.

oesteban commented 4 years ago

I might need to join over the phone but yes.

oesteban commented 4 years ago

Hi there,

Oscar Esteban is inviting you to a scheduled Zoom meeting.

Topic: Nipype 2.0 interfaces Time: Jan 10, 2020 01:00 PM Pacific Time (US and Canada)

Join from PC, Mac, Linux, iOS or Android: https://stanford.zoom.us/j/423507365

Or iPhone one-tap (US Toll): +18333021536,,423507365# or +16507249799,,423507365#

Or Telephone: Dial: +1 650 724 9799 (US, Canada, Caribbean Toll) or +1 833 302 1536 (US, Canada, Caribbean Toll Free)

Meeting ID: 423 507 365
International numbers available: https://stanford.zoom.us/u/acdjTpQDNo

Meeting ID: 423 507 365
SIP: 423507365@zoomcrc.com

EDIT: this is assuming @hjmjohnson can join Fri @ 4pm EST

effigies commented 4 years ago

Slice execution model XML reference: https://www.slicer.org/wiki/Documentation/Nightly/Developers/SlicerExecutionModel#Module_Description