niu-lab / msisensor2

Microsatellite instability (MSI) detection for tumor only data.
GNU General Public License v3.0
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models_hg38 does not contain my sites , how can i add #30

Open jiangldu opened 2 years ago

jiangldu commented 2 years ago

very happy to use msisensor2. now i am confusing. if the site does not in models_hg38, how can i add some new sites or build myself database.

command: "msisensor2 msi \ -M /Data/userhome/dujl/Biosoftware/msisensor2/models_hg38 \ ## this one -t ${sample}.rmdup.sort.bam \ -o ${sample}.msiensor2 "

bounlu commented 8 months ago

I am also wondering this.