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niuhuifei / popoolation

Automatically exported from code.google.com/p/popoolation
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about Mauve #5

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago 
Hello, I'm just wondering if Mauve installation is required for other scipts 
besides mauve-parser.pl ? I ask because I'd rather not install it if it isn't 
necessary. Thanks.

Original issue reported on code.google.com by zjas...@gmail.com on 3 Apr 2012 at 10:35

GoogleCodeExporter commented 9 years ago 
no its not necessary

Original comment by RoKof...@gmail.com on 30 Oct 2012 at 8:15

GoogleCodeExporter commented 9 years ago 
Dear Robert,

I am working with 100bp paired end data which I have aligned using BWA. I am 
wondering what advantage an alignment with Mauve offers over BWA. 

Is there a way of calculating Dxy with Popoolation without using a Mauve genome 
alignment, but e.g. the BWA alignment I already have? 

Thanks, Claudi

Original comment by Claudia....@gmail.com on 6 Aug 2013 at 6:19