njdowdy / tpt-taxonomy

Foundational taxonomic resources for the TPT project
GNU General Public License v3.0
6 stars 1 forks source link

question: are there synonyms beyond the Acari name list? #7

Closed jhpoelen closed 2 years ago

jhpoelen commented 2 years ago

related to https://github.com/globalbioticinteractions/globalbioticinteractions/issues/694

njdowdy commented 2 years ago

Could you clarify this question? Do you mean "do synonyms exist in other name lists", "do Acari synonyms exist beyond the Acari name list", or something else?

If the former - there are synonyms contained in the Phthiraptera and Siphonaptera datasets for example. If the latter - there are also names on GBIF that do not exist in these resources. If something else, please elaborate and I will try to answer.

jhpoelen commented 2 years ago

@njdowdy thanks for responding.

I meant to ask:

Do the TPT provided name lists contain synonyms beyond those in the TPT Acari name list?

I just wanted to confirm my observation that only TPT Acari names contained definitions of synonyms. Please let me know if this clarifies my question.

njdowdy commented 2 years ago

Ah, then yes - there are synonyms contained in the Phthiraptera and Siphonaptera datasets.

In the case of the Phthiraptera dataset they are stored in a perhaps unorthodox way, following the taxotools output pipeline. Essentially, the "accid" acts as a foreign key to the "accepted name". A little bit more work would need to be done to generate an "acceptedName" field for example. But the information is there.

jhpoelen commented 2 years ago

@njdowdy thanks for sharing that synonyms exist in the Phthiraptera and Siphonaptera datasets.

njdowdy commented 2 years ago

@jhpoelen sure! Sorry that wasn't more obvious.